Pedro Jorge Mendes dos Santos, Francisco José Moreira Couto, João Diogo Silva Ferreira. Validation of Automatic Similarity Measures. Master's dissertation, 2020 [Biblios]

João D. Ferreira, Francisco M. Couto. Semantic Similarity in Cheminformatics, In Cheminformatics and its Applications [Working Title]. IntechOpen, 2019 [Biblios]

João D. Ferreira, Francisco M. Couto. Multi-domain semantic similarity in biomedical research. BMC Bioinformatics, 20(S10), Springer Science and Business Media LLC, 2019 [Biblios]

Ana Raquel Ferreira Alqueidão, Ferreira, João Diogo Silva, Sousa, Paulo Paiva de. Gestão automática de dadores, transfusões e Banco de Sangue. Master's dissertation, 2019 [Biblios]

Henrique André da Silva Candeias, João Ferreira, Ricardo Nogueira. Solução mobile – banking, transações. Master's dissertation, 2018 [Biblios]

Isabela Mott Silva, Cátia Pesquita, João Ferreira. Investigating Semantic Similarity for Biomedical Ontology Alignment. Master's dissertation, 2018 [Biblios]

João D. Ferreira, Bruno Inácio, Reza M. Salek, Francisco M. Couto. Assessing Public Metabolomics Metadata, Towards Improving Quality. Journal of Integrative Bioinformatics, 14(4), Walter de Gruyter GmbH, 2017 [Biblios]

Andre Lamurias, João D. Ferreira, Luka A. Clarke, Francisco M. Couto. Generating a Tolerogenic Cell Therapy Knowledge Graph from Literature. Frontiers in Immunology, 8, Frontiers Media SA, 2017 [Biblios]

Ricardo Miguel Rodrigues Rito, Ferreira, João Diogo Silva, Marques, Ana Rute. Portal de gestão do utilizador da Ulisboa. Master's dissertation, 2017 [Biblios]

Bruno Inácio, João D. Ferreira, Francisco M. Couto. Metadata Analyser: Measuring Metadata Quality. In Practical Applications of Computational Biology and Bioinformatics (PACBB), pages 197-204. Springer International Publishing, 2017 [Biblios]

Inácio, Bruno Filipe Prudêncio, Couto, Francisco José Moreira, Ferreira, João Diogo Silva. Qanto valem os metadados?. Master's dissertation, 2016 [Biblios]

João Diogo Silva Ferreira, Couto, Francisco José Moreira. Semantic Similarity Across Biomedical Ontologies. PhD thesis, 2016 [Biblios]

André Lamúrias, João Ferreira, Francisco Couto. Improving chemical entity recognition through h-index based semantic similarity. JOURNAL OF CHEMINFORMATICS, 7(1):1-20, 2015 [Biblios]

André Lamurias, João Ferreira, Francisco Couto. Identifying interactions between chemical entities in biomedical text, 2014 [Biblios]

Cátia Pesquita, João Ferreira, Francisco Couto, Mário Silva. The epidemiology ontology: an ontology for the semantic annotation of epidemiological resources. JOURNAL OF BIOMEDICAL SEMANTICS, 5(4), 2014 [Biblios]

André Lamurias, João Ferreira, Francisco Couto. Chemical named entity recognition: Improving recall using a comprehensive list of lexical features. In 8th International Conference on Practical Applications of Computational Biology & Bioinformatics (PACBB), pages 253-260, 2014 [Biblios]

João Ferreira, B. Bono, Francisco Couto. From data to knowledge: a tool for clustering multi-scale resources for physiology research. In Virtual Physiological Human (VPH), 2014 [Biblios]

João Ferreira, Cátia Pesquita, Francisco Couto, Mário Silva. Digital preservation of epidemic resources: coupling metadata and ontologies. In 10th International Conference on Preservation of Digital Objects, 2013 [Biblios]

Cátia Pesquita, João Ferreira, Francisco Couto, Mário Silva. Semi-automated annotation of epidemiological resources. In Epiwork International Workshop on Digital Epidemiology, 2013 [Biblios]

João D. Ferreira, Catia Pesquita, Francisco M. Couto, Mário J. Silva. Bringing epidemiology into the Semantic Web. In International Conference on Biomedical Ontologies (ICBO), 2012 [Biblios]

J. Ferreira, F. Couto. Semantic similarity in the biomedical domain, 2012 [Biblios]

Francisco M Couto, João D Ferreira, João Zamite, Carlos Santos, Tiago Posse, Paulo Graça, Dulce Domingos, Mário J Silva. The Epidemic Marketplace Platform: towards semantic characterization of epidemiological resources using biomedical ontologies. In International Conference on Biomedical Ontologies,, 2012 [Biblios]

B. Tavares, H. Bastos, D. Faria, J. Ferreira, T. Grego, C. Pesquita, F. Couto. The biomedical ontology applications (BOA) framework. In International Conference on Biomedical Ontologies (ICBO), 2011, 2011 [Biblios]

J. Ferreira, F. Couto. Generic semantic relatedness measure for biomedical ontologies. In International Conference on Biomedical Ontologies (ICBO), 2011 [Biblios]

Bastos, Hugo, Couto, Francisco M, Ferreira, Joao D, Freire, João, Grego, Tiago, Pesquita, Catia, Vila Viçosa, Diogo. Chemical and Metabolic Pathway Semantic Similarity, 2010 [Biblios]

João Ferreira, David Batista, Francisco Couto, Mário J. Silva. The Geo-Net- PT/Yahoo! GeoPlanet (TM) concordance, 2010 [Biblios]

Tiago Grego, João D. Ferreira, Cátia Pesquita, Hugo Bastos, Diogo Vila Viçosa, João Freire, Francisco Couto. Chemical and Metabolic Pathway SemanticSimilarity, 2010 [Biblios]

João D. Ferreira, Francisco Couto. Semantic similarity for automatic classification of chemical compounds. PLOS COMPUTATIONAL BIOLOGY, 6(9), 2010 [Biblios]